- Class: 3
- Architecture: 3.30:2-Layer Sandwich
- Topology: 3.30.1300:Pantoate--beta-alanine Ligase; Chain: A,domain 2
- Homology: 3.30.1300.10:Pantoate-beta-alanine ligase, C-terminal domain
PDB Entries
PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | |||
---|---|---|---|---|---|---|---|---|
Amino Acid sequence | SCOPe Family Level | CATH Homology Level | ||||||
1iho | [A2] | [A2] | [A2] | 1.7 | EDO:1,2-ETHANEDIOL TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | |||
1mop | [A2] | [A2] | [A2] | 1.6 | EOH:ETHANOL GOL:GLYCEROL SO4:SULFATE ION | |||
1n2b | [A2] | [A2] | [A2] | 1.7 | APC:DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER EOH:ETHANOL GOL:GLYCEROL MG:MAGNESIUM ION PAF:PANTOATE SO4:SULFATE ION | |||
1n2e | [A2] | [A2] | [A2] | 1.6 | APC:DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER EOH:ETHANOL GOL:GLYCEROL MG:MAGNESIUM ION PAF:PANTOATE SO4:SULFATE ION | |||
1n2g | [A2] | [A2] | [A2] | 1.8 | APC:DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER EOH:ETHANOL GOL:GLYCEROL MG:MAGNESIUM ION SO4:SULFATE ION | |||
1n2h | [A2] | [A2] | [A2] | 2 | EOH:ETHANOL GOL:GLYCEROL MN:MANGANESE (II) ION PAJ:PANTOYL ADENYLATE SO4:SULFATE ION | |||
1n2i | [A2] | [A2] | [A2] | 1.7 | EOH:ETHANOL GOL:GLYCEROL PAJ:PANTOYL ADENYLATE SO4:SULFATE ION | |||
1n2j | [A2] | [A2] | [A2] | 1.8 | BAL:BETA-ALANINE EOH:ETHANOL GOL:GLYCEROL PAF:PANTOATE SO4:SULFATE ION | |||
1n2o | [A2] | [A2] | [A2] | 2.1 | BAL:BETA-ALANINE SO4:SULFATE ION | |||
1ufv | [A2] | [A2] | [A2] | 2.05 | CL:CHLORIDE ION GOL:GLYCEROL MSE:SELENOMETHIONINE | |||
1v8f | [A2] | [A2] | [A2] | 1.9 | 144:TRIS-HYDROXYMETHYL-METHYL-AMMONIUM CL:CHLORIDE ION GOL:GLYCEROL P6G:HEXAETHYLENE GLYCOL | |||
2a7x | [A2] | [A2] | [A2] | 1.7 | AMP:ADENOSINE MONOPHOSPHATE GOL:GLYCEROL SO4:SULFATE ION | |||
2a84 | [A2] | [A2] | [A2] | 1.55 | ATP:ADENOSINE-5___sq___-TRIPHOSPHATE GOL:GLYCEROL MG:MAGNESIUM ION | |||
2a86 | [A2] | [A2] | [A2] | 1.85 | AMP:ADENOSINE MONOPHOSPHATE BAL:BETA-ALANINE EOH:ETHANOL GOL:GLYCEROL SO4:SULFATE ION | |||
2a88 | [A2] | [A2] | [A2] | 1.7 | GOL:GLYCEROL SO4:SULFATE ION | |||
2ejc | [A2] | [A2] | [A2] | 2.4 | ACT:ACETATE ION ZN:ZINC ION | |||
2x3f | [A2] | [A2] | [A2] | 1.95 | APC:DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER SO4:SULFATE ION | |||
3ag5 | [A2] | [A2] | [A2] | 2.5 | ||||
3ag6 | [A2] | [A2] | [A2] | 1.85 | ACY:ACETIC ACID PAJ:PANTOYL ADENYLATE PG4:TETRAETHYLENE GLYCOL | |||
3cov | [A2] | [A2] | [A2] | 1.5 | EOH:ETHANOL GOL:GLYCEROL SO4:SULFATE ION | |||
3cow | [A2] | [A2] | [A2] | 1.8 | 52H:5___sq___-O-{[(2R)-2-HYDROXY-3,3-DIMETHYLBUTANOYL]SULFAMOYL}ADENOSINE EOH:ETHANOL GOL:GLYCEROL | |||
3coy | [A2] | [A2] | [A2] | 2.03 | 53H:5___sq___-O-[(3-METHYL-D-VALYL)SULFAMOYL]ADENOSINE EOH:ETHANOL GOL:GLYCEROL | |||
3coz | [A2] | [A2] | [A2] | 2 | 54H:5___sq___-O-(D-VALYLSULFAMOYL)ADENOSINE EOH:ETHANOL GOL:GLYCEROL SO4:SULFATE ION | |||
3imc | [A2] | [A2] | [A2] | 1.6 | BZ3:5-METHOXY-1H-INDOLE EOH:ETHANOL GOL:GLYCEROL SO4:SULFATE ION | |||
3ime | [A2] | [A2] | [A2] | 2.39 | BZ2:1-BENZOFURAN-2-CARBOXYLIC ACID EOH:ETHANOL GOL:GLYCEROL | |||
3img | [A2] | [A2] | [A2] | 1.8 | BZ2:1-BENZOFURAN-2-CARBOXYLIC ACID BZ3:5-METHOXY-1H-INDOLE EOH:ETHANOL GOL:GLYCEROL SO4:SULFATE ION | |||
3inn | [A4] | [A4] | [A4] | 2.1 | ATP:ADENOSINE-5___sq___-TRIPHOSPHATE UNX:UNKNOWN ATOM OR ION | |||
3iob | [A2] | [A2] | [A2] | 1.8 | A4D:5___sq___-THIOADENOSINE EOH:ETHANOL GOL:GLYCEROL SO4:SULFATE ION | |||
3ioc | [A2] | [A2] | [A2] | 2.5 | A5D:(2R,3R,4S,5S)-2-(6-AMINO-9H-PURIN-9-YL)-5-[(BENZYLDISULFANYL)METHYL]TETRAHYDROFURAN-3,4-DIOL GOL:GLYCEROL | |||
3iod | [A2] | [A2] | [A2] | 1.75 | A6D:(2R,3R,4S,5S)-2-(6-AMINO-9H-PURIN-9-YL)-5-{[(3-NITROBENZYL)DISULFANYL]METHYL}TETRAHYDROFURAN-3,4-DIOL EOH:ETHANOL GOL:GLYCEROL SO4:SULFATE ION | |||
3ioe | [A2] | [A2] | [A2] | 1.95 | A7D:5___sq___-S-[(3R)-3,4-DIHYDROXYBUTYL]-5___sq___-THIOADENOSINE EOH:ETHANOL GOL:GLYCEROL SO4:SULFATE ION | |||
3isj | [A2] | [A2] | [A2] | 2.2 | A8D:5-METHOXY-N-(METHYLSULFONYL)-1H-INDOLE-2-CARBOXAMIDE EOH:ETHANOL GOL:GLYCEROL SO4:SULFATE ION | |||
3iub | [A2] | [A2] | [A2] | 1.5 | EDO:1,2-ETHANEDIOL EOH:ETHANOL FG2:5-METHOXY-N-[(5-METHYLPYRIDIN-2-YL)SULFONYL]-1H-INDOLE-2-CARBOXAMIDE | |||
3iue | [A2] | [A2] | [A2] | 1.73 | EDO:1,2-ETHANEDIOL EOH:ETHANOL FG3:(5-METHOXY-2-{[(5-METHYLPYRIDIN-2-YL)SULFONYL]CARBAMOYL}-1H-INDOL-1-YL)ACETIC ACID GOL:GLYCEROL | |||
3ivc | [A2] | [A2] | [A2] | 2.13 | EOH:ETHANOL FG4:{2-[(1-BENZOFURAN-2-YLMETHOXY)CARBONYL]-5-METHOXY-1H-INDOL-1-YL}ACETIC ACID GOL:GLYCEROL SO4:SULFATE ION | |||
3ivg | [A2] | [A2] | [A2] | 1.95 | EDO:1,2-ETHANEDIOL EOH:ETHANOL FG5:(2-{[(1-BENZOFURAN-2-YLSULFONYL)AMINO]METHYL}-5-METHOXY-1H-INDOL-1-YL)ACETIC ACID GOL:GLYCEROL | |||
3ivx | [A2] | [A2] | [A2] | 1.73 | EDO:1,2-ETHANEDIOL EOH:ETHANOL FG6:{2-[(1-BENZOFURAN-2-YLSULFONYL)CARBAMOYL]-5-METHOXY-1H-INDOL-1-YL}ACETIC ACID GOL:GLYCEROL | |||
3le8 | [A2] | [A2] | [A2] | 1.7 | 2B5:2-(2-((BENZOFURAN-2-CARBOXAMIDO)METHYL)-5-METHOXY-1H-INDOL-1-YL)ACETIC ACID EDO:1,2-ETHANEDIOL EOH:ETHANOL GOL:GLYCEROL | |||
3mue | [A2] | [A2] | [A2] | 2.7 | ACY:ACETIC ACID EOH:ETHANOL GOL:GLYCEROL SO4:SULFATE ION | |||
3mxt | [A2] | [A2] | [A2] | 1.85 | CL:CHLORIDE ION FMT:FORMIC ACID GOL:GLYCEROL MG:MAGNESIUM ION MSE:SELENOMETHIONINE SO4:SULFATE ION | |||
3n8h | [A2] | [A2] | [A2] | 2 | ACY:ACETIC ACID AMP:ADENOSINE MONOPHOSPHATE GOL:GLYCEROL MSE:SELENOMETHIONINE PRO:PROLINE | |||
3q10 | [A2] | [A2] | [A2] | 1.83 | AMP:ADENOSINE MONOPHOSPHATE CL:CHLORIDE ION GOL:GLYCEROL IMD:IMIDAZOLE | |||
3q12 | [A2] | [A2] | [A2] | 1.58 | CL:CHLORIDE ION PAF:PANTOATE | |||
3qtt | [A2] | [A2] | [A2] | 2.6 | ANP:PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER BAL:BETA-ALANINE MG:MAGNESIUM ION MSE:SELENOMETHIONINE PRO:PROLINE | |||
3uk2 | [A2] | [A2] | [A2] | 2.25 | AMP:ADENOSINE MONOPHOSPHATE CL:CHLORIDE ION EDO:1,2-ETHANEDIOL MLT:D-MALATE | |||
3uy4 | [A2] | [A2] | [A2] | 1.85 | AMP:ADENOSINE MONOPHOSPHATE GOL:GLYCEROL MSE:SELENOMETHIONINE PAU:PANTOTHENOIC ACID | |||
4ddh | [A2] | [A2] | [A2] | 2.07 | EDO:1,2-ETHANEDIOL EOH:ETHANOL GOL:GLYCEROL MS0:(6-METHOXY-1-BENZOFURAN-3-YL)ACETIC ACID | |||
4ddk | [A2] | [A2] | [A2] | 1.75 | 0HN:1,3-BENZODIOXOLE-5-CARBOXYLIC ACID EDO:1,2-ETHANEDIOL EOH:ETHANOL GOL:GLYCEROL | |||
4ddm | [A2] | [A2] | [A2] | 1.83 | 0HO:2,1,3-BENZOTHIADIAZOLE-5-CARBOXYLIC ACID EDO:1,2-ETHANEDIOL EOH:ETHANOL GOL:GLYCEROL | |||
4de5 | [A2] | [A2] | [A2] | 2.25 | 0JD:(2S)-2,3-DIHYDRO-1,4-BENZODIOXINE-2-CARBOXYLIC ACID EDO:1,2-ETHANEDIOL EOH:ETHANOL GOL:GLYCEROL | |||
4ef6 | [A2] | [A2] | [A2] | 1.94 | EDO:1,2-ETHANEDIOL EOH:ETHANOL GOL:GLYCEROL I2E:3-(1,3-BENZODIOXOL-5-YL)PROPANOIC ACID | |||
4efk | [A2] | [A2] | [A2] | 1.7 | 0OC:N,N-DIMETHYLTHIOPHENE-3-SULFONAMIDE EOH:ETHANOL GOL:GLYCEROL IMD:IMIDAZOLE SO4:SULFATE ION | |||
4fzj | [A2] | [A2] | [A2] | 1.63 | 0W1:1,3-DIMETHYL-1H-THIENO[2,3-C]PYRAZOLE-5-CARBOXYLIC ACID EDO:1,2-ETHANEDIOL EOH:ETHANOL GOL:GLYCEROL | |||
4g5f | [A2] | [A2] | [A2] | 2.33 | 0JD:(2S)-2,3-DIHYDRO-1,4-BENZODIOXINE-2-CARBOXYLIC ACID 15N:(2R)-2,3-DIHYDRO-1,4-BENZODIOXINE-2-CARBOXYLIC ACID EDO:1,2-ETHANEDIOL EOH:ETHANOL GOL:GLYCEROL | |||
4g5y | [A2] | [A2] | [A2] | 1.8 | 0OC:N,N-DIMETHYLTHIOPHENE-3-SULFONAMIDE ATP:ADENOSINE-5___sq___-TRIPHOSPHATE EOH:ETHANOL GOL:GLYCEROL MG:MAGNESIUM ION | |||
4mq6 | [A2] | [A2] | [A2] | 1.7 | 29W:(5-METHOXY-2-{[(4-METHYLPHENYL)SULFONYL]CARBAMOYL}-1H-INDOL-1-YL)ACETIC ACID EDO:1,2-ETHANEDIOL EOH:ETHANOL | |||
4mue | [A2] | [A2] | [A2] | 2.06 | 2DH:[5-METHOXY-2-({[4-(TRIFLUOROMETHYL)PHENYL]SULFONYL}CARBAMOYL)-1H-INDOL-1-YL]ACETIC ACID EDO:1,2-ETHANEDIOL EOH:ETHANOL | |||
4muf | [A2] | [A2] | [A2] | 2.5 | 2DJ:(2-{[(4-TERT-BUTYLPHENYL)SULFONYL]CARBAMOYL}-5-METHOXY-1H-INDOL-1-YL)ACETIC ACID EOH:ETHANOL | |||
4mug | [A2] | [A2] | [A2] | 1.54 | 2DK:{5-METHOXY-2-[(MORPHOLIN-4-YLSULFONYL)CARBAMOYL]-1H-INDOL-1-YL}ACETIC ACID EDO:1,2-ETHANEDIOL EOH:ETHANOL GOL:GLYCEROL | |||
4muh | [A2] | [A2] | [A2] | 1.72 | 2DN:[2-({[5-(ACETYLAMINO)-1,3,4-THIADIAZOL-2-YL]SULFONYL}CARBAMOYL)-5-METHOXY-1H-INDOL-1-YL]ACETICACID EDO:1,2-ETHANEDIOL EOH:ETHANOL | |||
4mui | [A2] | [A2] | [A2] | 2.1 | 2DQ:(5-METHOXY-2-{[(4-METHOXYPHENYL)SULFONYL]CARBAMOYL}-1H-INDOL-1-YL)ACETIC ACID EDO:1,2-ETHANEDIOL EOH:ETHANOL | |||
4muj | [A2] | [A2] | [A2] | 1.92 | 2DU:{2-[(BENZYLSULFONYL)CARBAMOYL]-5-METHOXY-1H-INDOL-1-YL}ACETIC ACID EDO:1,2-ETHANEDIOL EOH:ETHANOL GOL:GLYCEROL | |||
4muk | [A2] | [A2] | [A2] | 1.9 | 2DV:[5-METHOXY-2-({[4-(TRIFLUOROMETHYL)BENZYL]SULFONYL}CARBAMOYL)-1H-INDOL-1-YL]ACETIC ACID EDO:1,2-ETHANEDIOL EOH:ETHANOL | |||
4mul | [A2] | [A2] | [A2] | 1.75 | 2DW:{5-METHOXY-2-[(NAPHTHALEN-2-YLSULFONYL)CARBAMOYL]-1H-INDOL-1-YL}ACETIC ACID EDO:1,2-ETHANEDIOL EOH:ETHANOL | |||
4mun | [A2] | [A2] | [A2] | 1.57 | 2DZ:[5-METHOXY-2-({[2-NITRO-4-(TRIFLUOROMETHYL)PHENYL]SULFONYL}CARBAMOYL)-1H-INDOL-1-YL]ACETIC ACID EDO:1,2-ETHANEDIOL EOH:ETHANOL GOL:GLYCEROL | |||
5hg0 | [A2] | [A2] | [A2] | 2.4 | MSE:SELENOMETHIONINE SAM:S-ADENOSYLMETHIONINE | |||
5kwv | [A2] | [A2] | [A2] | 2.25 | ANP:PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | |||
5ucr | [A2] | [A2] | [A2] | 2.25 | ALA:ALANINE ANP:PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER MG:MAGNESIUM ION |
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA